• Gene Finding
• Sequence comparison
• Protein analysis
• Genome Explorer
• Search for motifs
• Sequences manipulation
• Clustering ESTs & Synteny
   

MolQuest - Bioinformatics Toolbox for analysis of biomedical data

[ MQ-Screenshot-1 ] [ MQ-Screenshot-2 ] [ MQ-Screenshot-3 ] [ MQ-Screenshot-4 ]

New version of MolQuest has been released and is now available for downloading

MolQuest is the most comprehensive, easy-to-use desktop application for sequence analysis and molecular biology data management. MolQuest ver. 2.1.1 is now released and available for downloading as a trial version here. It includes the fastest and most accurate family of eukaryotic genefinding programs, fgenesh/fgenesh+, for a variety of different genomes, as well as pipelines for fully automatic annotation of eukaryotic (fgenesh++) and bacterial (fgenesb) genomes, that were widely used in scientific publications (see here) and are well known for their accuracy. The package provides a user-friendly interface for primer design, internet database searches, gene prediction, promoter identification, regulatory elements mapping, patterns discovery protein analysis, multiple sequence alignment, phylogenetic reconstruction, and a wide variety of other functions, for instance:

• Run common bioinformatics tasks such as BLAST searching, gene finding on multiple sequences in a batch.
• Configurable analysis options allow advanced users to perform sophisticated data analysis
• Provides annotation and visualization helping analyze the results and presenting them for publication.
• Provides a graphical user interface for constructing pipelines.
• Allows user to integrate any console applications into MolQuest GUI shell.

The following programs include graphic viewers for visual and interactive analysis of their results:

• 3D-Comp - 3D Explorer
• 3D-Match - 3D Explorer
• AbIni3D - 3D Explorer
• GetAtoms - 3D Explorer
• MolDyn - 3D Explorer
• MolMech - 3D Explorer
• FieldCorr - Graph viewer
• GeneCorr - Graph viewer
• SelCorr - Graph viewer
• Means - Graph viewer
• Variances - Graph viewer
• FindTerm - RNA Secondary structure viewer
• FoldRNA - RNA Secondary structure viewer
• BestPal-H - RNA Secondary structure viewer
• BestPal-W - RNA Secondary structure viewer
• SeqMatch-N - Alignment viewer
• SeqMatchNW-N - Alignment viewer
• SeqMatchSW-N - Alignment viewer
• SeqMatch-P - Alignment viewer
• SeqMatchNW-P - Alignment viewer
• SeqMatchSW-P - Alignment viewer
• MaliN - MaliN viewer
• MaliP - MaliP viewer
• Restrictase - Restrictase viewer
• LCRep - Sequence Editor
• LCRep-P - Sequence Editor
• TandemRep - Sequence Editor
• TandemRep-P - Sequence Editor
• ABSplit - Sequence Editor
• ReplaceSeq - Sequence Editor
• GetSeq - Sequence Editor
• Complement - Sequence Editor
• CutGet - Sequence Editor
• AddSeq - Sequence Editor
• InsSeq - Sequence Editor

MolQuest Learning Demos (Macromedia Flash):

MolQuest, with its friendly interface, is particularly suited for education and learning bioinformatics, university students, MSc or PhD research projects, as well as for integration of bioinformatics into high school and college curriculums.

In the next version of MolQuest, we plan to add scientific graphics and capabilities of building custom data analysis pipelines (work flows).

View list of hundreds of scientific publications that used programs that are part of MolQuest package.

MolQuest offers sales assistance and technical support worldwide from our US office.